Ewa Nowara

Senior Machine Learning Scientist at Prescient Design (Genentech)

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I study how to adapt, steer, and post-train generative models for reliable scientific discovery, especially under scarce or imperfect feedback and competing objectives. My work draws on reinforcement learning, agentic search, autoregressive transformers, and diffusion and flow models. At Prescient Design, I lead research from method development through deployment for molecular and protein design.

Previously, I was a Research Scientist at Meta Reality Labs working on latent diffusion models and 3D generative models for AR/VR. I received my Ph.D. from Rice University in 2021 with Prof. Ashok Veeraraghavan, followed by a postdoc at Johns Hopkins with Prof. Rama Chellappa.

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Selected Publications

Full list on Google Scholar.

PairIT PairIT: Autoregressive Transformers for Low-Data Molecule Optimization
Hannah Lawrence, Bodhi Vani, Ji Won Park, Natasa Tagasovska, Samuel Stanton, Andrew Watkins, Michael Maser, Ewa M. Nowara
Under review at NeurIPS, 2026
OpenReview

Autoregressive transformer for prompt-guided, multi-property molecule generation in low-data settings, further improved through RL post-training.

Training Dynamics Training Dynamics of Learning 3D-Rotational Equivariance
Max W. Shen*, Ewa M. Nowara*, Michael Maser, Kyunghyun Cho
TMLR, 2025  ยท  Best Paper Award, AI for Science Workshop at NeurIPS 2025
OpenReview / code

We investigate when 3D-rotational equivariance can be learned from data during training rather than hard-coded into model architectures, and how it emerges over the course of training.

Do We Need Equivariant Models Do We Need Equivariant Models for Molecule Generation?
Ewa M. Nowara, Joshua Rackers, Patricia Suriana, Pan Kessel, Max W. Shen, Andrew Watkins, Michael Maser
arXiv, 2025
arXiv

We examine whether explicit equivariance is necessary for 3D molecular generative models, or whether comparable performance can be achieved with non-equivariant architectures and appropriate training.

Nebula Nebula: Neural Empirical Bayes Under Latent Representations for Efficient and Controllable Design of Molecular Libraries
Ewa M. Nowara, Pedro O. Pinheiro, Sai Pooja Mahajan, Omar Mahmood, Andrew Watkins, Saeed Saremi, Michael Maser
arXiv, 2024
arXiv / code

A latent generative model for controllable design of molecular libraries, combining neural empirical Bayes with learned 3D latent representations to enable efficient exploration of chemical space.

Beyond Atoms Beyond Atoms: Evaluating Electron Density Representation for 3D Molecular Learning
Patricia Suriana, Joshua Rackers, Ewa M. Nowara, Pedro O. Pinheiro, John M. Nicoloudis, Vishnu Sresht
arXiv, 2025
arXiv

We evaluate electron-density-based representations for 3D molecular learning as a richer alternative to atom-centric representations.

Earlier Work

Selected work from my Ph.D. and postdoc on computer vision and camera-based physiological sensing.

CACM Seeing Beneath the Skin with Computational Photography
Ewa M. Nowara, Daniel McDuff, Ashok Veeraraghavan
Communications of the ACM, 2022

A review of state-of-the-art physiological and medical imaging modalities that leverage recent advances in computational photography.

TransLocator Where in the World is This Image? Transformer-Based Geo-Localization in the Wild
Shraman Pramanick, Ewa M. Nowara, Josh Gleason, Carlos D. Castillo, Rama Chellappa
ECCV, 2022
arXiv / code

TransLocator: a dual-branch Vision Transformer for geolocalizing images anywhere in the world, using both RGB and semantic segmentation features for robustness to appearance variation.

Benefit of Distraction The Benefit of Distraction: Denoising Remote Vitals Measurements Using Inverse Attention
Ewa M. Nowara, Daniel McDuff, Ashok Veeraraghavan
ICCV, 2021
arXiv

We use the inverse of an attention mask to estimate corruption in video regions without the signal of interest, then use it to denoise temporal observations of physiological signals.

Magnification and Measurement Combining Magnification and Measurement for Non-Contact Cardiac Monitoring
Ewa M. Nowara, Daniel McDuff, Ashok Veeraraghavan
CVPR Workshops, 2021

We improve the generalizability of deep learning models for non-contact cardiac monitoring by augmenting the training set videos with “magnified” videos. These data augmentations are geared towards revealing useful features for recovering the physiological signals.

Warm Bodies “Warm Bodies”: A Post-Processing Technique for Animating Dynamic Blood Flow on Photos and Avatars
Daniel McDuff, Ewa M. Nowara
CHI, 2021
arXiv / video

We animate blood flow patterns to augment the appearance of synthetic avatars and photo-realistic faces based on a data-driven physiological model.

Compressed Video Pulse Systematic Analysis of Video-Based Pulse Measurement from Compressed Videos
Ewa M. Nowara, Daniel McDuff, Ashok Veeraraghavan
Biomedical Optics Express, 2021
video

We show that deep learning models can learn how noise at different video compression levels affects the physiological signals and are able to reliably recover vital signs from highly compressed videos, even in presence of large motion.

Skin Tone Meta-Analysis A Meta-Analysis of the Impact of Skin Tone and Gender on Non-Contact Photoplethysmography Measurements
Ewa M. Nowara, Daniel McDuff, Ashok Veeraraghavan
CVPR Workshops, 2020
video

We evaluate how much gender and skin tone affect vital signs estimation from video. We find that performance drops significantly on videos of people with very dark skin tones, especially for machine learning algorithms.

NIR Driving Near-Infrared Imaging Photoplethysmography During Driving
Ewa M. Nowara, Tim K. Marks, Hassan Mansour, Ashok Veeraraghavan
Trans. on Intelligent Transportation Systems, 2020
video

We reduce most outside light variations using narrow-band near-infrared (NIR) video recordings to obtain reliable heart-rate estimates. We present a novel optimization algorithm, AutoSparsePPG, that leverages the quasi-periodicity of physiological signals and outperforms prior methods.

PPG3D PPG3D: Does 3D Head Tracking Improve Camera-Based PPG Estimation?
Genki Nagamatsu, Ewa M. Nowara, Amruta Pai, Ashok Veeraraghavan, Hiroshi Kawasaki
EMBC, 2020

We use 3D face tracking to estimate the position of facial landmarks with pixel-level accuracy to improve motion robustness of camera-based vital sign estimation.

Video Compression PPG Combating the Impact of Video Compression on Non-Contact Vital Sign Measurement Using Supervised Learning
Ewa M. Nowara, Daniel McDuff
ICCV Workshops, 2019

Small intensity variations in the skin related to physiological signals can be recovered even from very compressed videos with supervised deep learning.

SparsePPG SparsePPG: Towards Driver Monitoring Using Camera-Based Vital Signs Estimation in Near-Infrared
Ewa M. Nowara, Tim K. Marks, Hassan Mansour, Ashok Veeraraghavan
CVPR Workshops, 2018

Narrow-bandwidth near-infrared active illumination for camera-based vital signs, with a novel signal tracking and denoising algorithm based on Robust PCA and sparse frequency estimation.

PPGSecure PPGsecure: Biometric Presentation Attack Detection Using Photoplethysmograms
Ewa M. Nowara, Ashutosh Sabharwal, Ashok Veeraraghavan
Face and Gesture, 2017

A machine learning system to prevent face-spoofing attacks by detecting and analyzing the heartbeat signal from face videos.

Patents

M.R. Maser, E.M. Nowara, P.H.O. Pinheiro, S. Saremi. Three-Dimensional Molecule Generation in Latent Voxelized Space. US Patent App. 19/390,374, 2026.

P.H.O. Pinheiro, S. Saremi, M.R. Maser, E.M. Nowara. Three-Dimensional Molecule Generation by Denoising Voxel Grids. US Patent App. 19/390,401, 2026.

T. Marks, H. Mansour, E.M. Nowara, Y. Nakamura, A. Veeraraghavan. System and Method for Remote Measurements of Vital Signs of a Person in a Volatile Environment. US Patent App. 17/199,696, 2021.

T. Marks, H. Mansour, E.M. Nowara, Y. Nakamura, A. Veeraraghavan. System and Method for Remote Measurements of Vital Signs. US Patent App. 16/167,668, 2019.

Dissertation
Rice Towards Robust Imaging Photoplethysmography in Unconstrained Settings
Ewa M. Nowara
Electrical and Computer Engineering, Rice University, April 2021
Awards and Honors

Website credits to Jon Barron.